I am facing two visual problems with the given D3 forced graph.
The last inch of each link is still visible. The arrowhead should end exactly at the node edge, which is the case, but the red link underneath is visible. I could adjust the link stroke-width or the arrow size but actually do not want to change those attributes.
The radius of a node increases on a mouseenter event. If node size increases, the arrowhead is out of position and does not end on the node endge anymore. I assume I need to adjust the tick function, but do not find a proper starting point.
I appreciate any link, hint, help which gets me closer to the result.
var width = window.innerWidth,
height = window.innerHeight;
var svg = d3.select("body").append("svg")
.attr("width", width)
.attr("height", height)
.call(d3.zoom().on("zoom", function(event) {
svg.attr("transform", event.transform)
}))
.append("g")
////////////////////////
// outer force layout
var data = {
"nodes":[
{ "id": "A" },
{ "id": "B" },
{ "id": "C" },
],
"links": [
{ "source": "A", "target": "B"},
{ "source": "B", "target": "C"},
{ "source": "C", "target": "A"}
]
};
var simulation = d3.forceSimulation()
.force("size", d3.forceCenter(width / 2, height / 2))
.force("charge", d3.forceManyBody().strength(-1000))
.force("link", d3.forceLink().id(function (d) { return d.id }).distance(250))
svg.append("defs").append("marker")
.attr('id', 'arrowhead')
.attr('viewBox', '-0 -5 10 10')
.attr("refX", 23.5)
.attr("refY", 0)
.attr('orient', 'auto')
.attr('markerWidth', 10)
.attr('markerHeight', 10)
.attr("orient", "auto")
.append('svg:path')
.attr('d', 'M 0,-5 L 10 ,0 L 0,5')
.attr('fill', '#999')
.style('stroke', 'none');
var links = svg.selectAll(".links")
.data(data.links)
.join("line")
.attr("stroke", "red")
.attr("stroke-width", 3)
.attr("marker-end", "url(#arrowhead)")
var nodes = svg.selectAll("g.outer")
.data(data.nodes, function (d) { return d.id; })
.enter()
.append("g")
.attr("class", "outer")
.attr("id", function (d) { return d.id; })
.call(d3.drag()
.on("start", dragStarted)
.on("drag", dragged)
.on("end", dragEnded)
);
nodes
.append("circle")
.style("fill", "lightgrey")
.style("stroke", "blue")
.attr("r", 40)
.on("mouseenter", function() {
d3.select(this)
.transition()
.duration(250)
.attr("r", 40 * 1.3)
.attr("fill", "blue")
})
.on("mouseleave", function() {
d3.select(this)
.transition()
.duration(250)
.attr("r", 40)
.attr("fill", "lightgrey")
})
simulation
.nodes(data.nodes)
.on("tick", tick)
simulation
.force("link")
.links(data.links)
function tick() {
links
.attr("x1", function (d) { return d.source.x; })
.attr("y1", function (d) { return d.source.y; })
.attr("x2", function (d) { return d.target.x; })
.attr("y2", function (d) { return d.target.y; });
nodes
.attr("transform", d => `translate(${d.x}, ${d.y})`);
}
function dragStarted(event, d) {
if (!event.active) simulation.alphaTarget(0.3).restart();
d.fx = d.x;
d.fy = d.y;
}
function dragged(event, d) {
d.fx = event.x;
d.fy = event.y;
}
function dragEnded(event, d) {
if (!event.active) simulation.alphaTarget(0);
d.fx = null;
d.fy = null;
}
body {
background: whitesmoke,´;
overflow: hidden;
margin: 0px;
}
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">
<title>D3v7</title>
<!-- d3.js framework -->
<script src="https://d3js.org/d3.v7.js"></script>
</head>
<body>
</body>
</html>
solution
at the moment I can think of two solutions.
calculate each <path(.links)/> vector and subtract with extended circle radius
give offset to each <marker />
personally I've chosen the 2nd solution; it requires less computation and easier to understand.
1. give each links custom arrowhead
add separate arrowheads for each link because it seems individual offset is not supported by svg path.
// add custom arrowheads for each link
// to avoid exhaustive computations
svg.append("defs").selectAll('marker')
.data(data.links)
.join("marker")
.attr('id', d => `arrowhead-target-${d.target}`)
// ...
var links = svg.selectAll(".links")
.data(data.links)
.join("line")
.attr("stroke", "red")
.attr("stroke-width", 3)
.attr("marker-end", d => `url(#arrowhead-target-${d.target})`)
// add source and target so that it can be traced back
2. extend, subtract each individual marker's offset with mouseevent
the offset for <marker /> is applied with .refX, .refY attributes, as noted in MDN docs
nodes
.append("circle")
.style("fill", "lightgrey")
.style("stroke", "blue")
.attr("r", 40)
.on("mouseenter", function(ev, d) {
// trace back to custom arrowhead with given id
const arrowHead = d3.select(`#arrowhead-target-${d.id}`)
arrowHead.transition().duration(250).attr('refX', 40)
d3.select(this)
.transition()
.duration(250)
.attr("r", 40 * 1.3)
.attr("fill", "blue")
})
.on("mouseleave", function(ev, d) {
const arrowHead = d3.select(`#arrowhead-target-${d.id}`)
arrowHead.transition().duration(250).attr('refX', 23.5)
d3.select(this)
.transition()
.duration(250)
.attr("r", 40)
.attr("fill", "lightgrey")
})
Try run the code below. The size of extension and subtraction is purposefully exaggerated so that you can see the difference.
var width = window.innerWidth,
height = window.innerHeight;
var svg = d3.select("body").append("svg")
.attr("width", width)
.attr("height", height)
.call(d3.zoom().on("zoom", function(event) {
svg.attr("transform", event.transform)
}))
.append("g")
////////////////////////
// outer force layout
var data = {
"nodes":[
{ "id": "A" },
{ "id": "B" },
{ "id": "C" },
],
"links": [
{ "source": "A", "target": "B"},
{ "source": "B", "target": "C"},
{ "source": "C", "target": "A"}
]
};
var simulation = d3.forceSimulation()
.force("size", d3.forceCenter(width / 2, height / 2))
.force("charge", d3.forceManyBody().strength(-1000))
.force("link", d3.forceLink().id(function (d) { return d.id }).distance(250))
// add custom arrowheads for each link
// to avoid exhaustive computations
svg.append("defs").selectAll('marker')
.data(data.links)
.join("marker")
.attr('id', d => `arrowhead-target-${d.target}`)
.attr('viewBox', '-0 -5 10 10')
.attr("refX", 23.5)
.attr("refY", 0)
.attr('orient', 'auto')
.attr('markerWidth', 10)
.attr('markerHeight', 10)
.attr("orient", "auto")
.append('svg:path')
.attr('d', 'M 0,-5 L 10 ,0 L 0,5')
.attr('fill', '#999')
.style('stroke', 'none');
var links = svg.selectAll(".links")
.data(data.links)
.join("line")
.attr("stroke", "red")
.attr("stroke-width", 3)
.attr("marker-end", d => `url(#arrowhead-target-${d.target})`)
// add source and target so that it can be traced back
.attr('data-source', d => d.source)
.attr('data-target', d => d.target)
var nodes = svg.selectAll("g.outer")
.data(data.nodes, function (d) { return d.id; })
.enter()
.append("g")
.attr("class", "outer")
.attr("id", function (d) { return d.id; })
.call(d3.drag()
.on("start", dragStarted)
.on("drag", dragged)
.on("end", dragEnded)
);
nodes
.append("circle")
.style("fill", "lightgrey")
.style("stroke", "blue")
.attr("r", 40)
.on("mouseenter", function(ev, d) {
// trace back to custom arrowhead with given id
const arrowHead = d3.select(`#arrowhead-target-${d.id}`)
arrowHead.transition().duration(250).attr('refX', 40)
d3.select(this)
.transition()
.duration(250)
.attr("r", 40 * 1.3)
.attr("fill", "blue")
})
.on("mouseleave", function(ev, d) {
const arrowHead = d3.select(`#arrowhead-target-${d.id}`)
arrowHead.transition().duration(250).attr('refX', 23.5)
d3.select(this)
.transition()
.duration(250)
.attr("r", 40)
.attr("fill", "lightgrey")
})
simulation
.nodes(data.nodes)
.on("tick", tick)
simulation
.force("link")
.links(data.links)
function tick() {
links
.attr("x1", function (d) { return d.source.x; })
.attr("y1", function (d) { return d.source.y; })
.attr("x2", function (d) { return d.target.x; })
.attr("y2", function (d) { return d.target.y; });
nodes
.attr("transform", d => `translate(${d.x}, ${d.y})`);
}
function dragStarted(event, d) {
if (!event.active) simulation.alphaTarget(0.3).restart();
d.fx = d.x;
d.fy = d.y;
}
function dragged(event, d) {
d.fx = event.x;
d.fy = event.y;
}
function dragEnded(event, d) {
if (!event.active) simulation.alphaTarget(0);
d.fx = null;
d.fy = null;
}
body {
background: whitesmoke,´;
overflow: hidden;
margin: 0px;
}
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">
<title>D3v7</title>
<!-- d3.js framework -->
<script src="https://d3js.org/d3.v7.js"></script>
</head>
<body>
</body>
</html>
Related
I tried to implement a 3D force directed graph in d3.js by the help of the following codes. But was unable to create the 3D network by adding the z-coordinates.
<!DOCTYPE html>
<meta charset="utf-8">
<style>
.node {
fill: blue;
stroke: black;
stroke-width: 2px;
}
.node.visited {
fill: red;
}
.link {
stroke-width: 2px;
}
</style>
<body>
<script src="https://d3js.org/d3.v3.min.js"></script>
<script>
var width = 640;
var height = 480;
var links = [{
source: 'Rohit',
target: 'Deep'
},
{
source: 'Deep',
target: 'Deepa'
},
{
source: 'Deepa',
target: 'Rohit'
},
];
var nodes = [{
"id": 1,
"desc": "Rohit",
"x": 121.0284957885742,
"y": 116.3165512084961,
"z": 59.36788940429688
},
{
"id": 2,
"desc": "Deep",
"x": 12.10284957885742,
"y": 116.3165512084961,
"z": 5.936788940429688
},
{
"id": 3,
"desc": "Deepa",
"x": 12.10284957885742,
"y": 11.63165512084961,
"z": 5.936788940429688
}
];
//adding to nodes
links.forEach(function(link) {
link.source = nodes[link.source] ||
(nodes[link.source] = {
name: link.source
});
link.target = nodes[link.target] ||
(nodes[link.target] = {
name: link.target
});
});
//adding svg to body
var svg = d3.select('body').append('svg')
.attr('width', width)
.attr('height', height);
var defs = svg.append('defs');
var gradient = defs
.append('linearGradient')
.attr('id', 'svgGradient')
.attr('x1', '0%')
.attr('x2', '10%')
.attr('y1', '0%')
.attr('y2', '10%');
gradient
.append('stop')
.attr('class', 'start')
.attr('offset', '0%')
.attr('start-color', 'red')
.attr('start-opacity', 1);
gradient
.append('stop')
.attr('class', 'end')
.attr('offset', '100%')
.attr('stop-color', 'blue')
.attr('stop-opacity', 1);
var force = d3.layout.force()
.size([width, height])
.nodes(d3.values(nodes))
.links(links)
.on("tick", tick)
.linkDistance(300)
.start();
var link = svg.selectAll('.link')
.data(links)
.enter().append('line')
.attr('class', 'link')
.attr('stroke', 'url(#svgGradient)');
var node = svg.selectAll('.node')
.data(force.nodes())
.enter().append('circle')
.attr('class', 'node')
.on("click", clicked)
.attr('r', width * 0.03)
.attr('cx', function(d) {
return d.x;
})
.attr('cy', function(d) {
return d.y;
})
.attr('cz', function(d){
return d.z;
});
//Code for clicking func.
function clicked(event, d) {
if (event.defaultPrevented) return; // dragged
d3.select(this).transition()
.style("fill", "black")
.attr("r", width * 0.2)
.transition()
.attr("r", width * 0.03)
.transition()
.style("fill", "blue")
//.attr("fill", d3.schemeCategory10[d.index % 10]);
}
//define the tick func.
function tick(e) {
node
.attr('cx', function(d) {
return d.x;
})
.attr('cy', function(d) {
return d.y;
})
.attr('cz', function(d) {
return d.z;
})
.call(force.drag);
link
.attr('x1', function(d) {
return d.source.x;
})
.attr('y1', function(d) {
return d.source.y;
})
.attr('z1', function(d) {
return d.source.z;
})
.attr('x2', function(d) {
return d.target.x;
})
.attr('y2', function(d) {
return d.target.y;
})
.attr('z2', function(d) {
return d.source.z;
})
}
</script>
</body>
The image that came was carrying two parts one graph where the nodes are taking (x-y) coordinates assigned to them. And then I had another graph where the nodes are taking all x-y-z coordinates.
Can anyone please help us by telling how can we add the z co-ordinates to code.
Problem: The Gooey effect applies to the links too. Which creates a teardrop shaped frame instead of an circle.
The snipped contains a dragged() function which allows the user to tear off node 1 from node 0. Further it is possible to connect node 1 with node 0 again with the help of dragging. The code isn´t clean at all, as its a playground only.
Goal: How can I exclude the links from the Gooey effect in a way, that all links are displayed correctly and still achieve a proper circled shape. The shape of the Gooey effect can be manipulated by changing the -5 to -40, unfortunately it will hide the links completely:
.attr("values", "1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 50 -5")
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">
<title>D3v6 Playground</title>
<!-- call external d3.js framework -->
<script src="https://d3js.org/d3.v6.js"></script>
</head>
<style>
body {
overflow: hidden;
margin: 0px;
}
.canvas {
background-color: rgb(220, 220, 220);
}
.node {
cursor: pointer;
}
.node:hover {
stroke: red
}
.link {
fill: none;
cursor: default;
stroke: rgb(0, 0, 0);
stroke-width: 3px;
}
</style>
<body>
<svg id="svg"> </svg>
<script>
var graph = {
"nodes": [
{
"id": 0,
},
{
"id": 1,
},
{
"id": 2,
}
],
"links": [
{
"source": 1,
"target": 0,
},
{
"source": 2,
"target": 0,
},
]
}
var width = window.innerWidth
var height = window.innerHeight
var svg = d3.select("svg")
.attr("class", "canvas")
.attr("width", width)
.attr("height", height)
.call(d3.zoom().on("zoom", function (event) {
svg.attr("transform", event.transform)
}))
.append("g")
.style("filter", "url(#gooey)")
// remove zoom on dblclick listener
d3.select("svg").on("dblclick.zoom", null)
var linkContainer = svg.append("g").attr("class", "linkContainer")
var nodeContainer = svg.append("g").attr("class", "nodeContainer")
var isSpliced = false;
var simulation = d3.forceSimulation()
.force("link", d3.forceLink().id(function (d) {
return d.id;
}).distance(150))
.force("charge", d3.forceManyBody().strength(-50))
.force("center", d3.forceCenter(width / 2, height / 2))
.force("collision", d3.forceCollide().radius(30))
//###############################################
//######### SVG Filter for Gooey effect #########
//###############################################
var defs = svg.append("defs");
var filter = defs.append("filter").attr("id", "gooey");
filter.append("feGaussianBlur")
.attr("in", "SourceGraphic")
.attr("stdDeviation", "10")
.attr("result", "blur");
filter.append("feColorMatrix")
.attr("in", "blur")
.attr("mode", "matrix")
.attr("values", "1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 50 -5")
.attr("result", "gooey");
filter.append("feComposite")
.attr("in", "SourceGraphic")
.attr("in2", "gooey")
.attr("operator", "atop");
initialize()
//###############################################
//############## Initialization #################
//###############################################
function initialize() {
link = linkContainer.selectAll(".link")
.data(graph.links)
.join("line")
.attr("class", "link")
node = nodeContainer.selectAll(".node")
.data(graph.nodes, d => d.id)
.join("g")
.attr("class", "node")
.call(d3.drag()
.on("start", dragStarted)
.on("drag", dragged)
.on("end", dragEnded)
)
node.selectAll("circle")
.data(d => [d])
.join("circle")
.attr("r", 30)
.style("fill", "white")
node.selectAll("text")
.data(d => [d])
.join("text")
.style("class", "icon")
.attr("font-family", "FontAwesome")
.attr("dominant-baseline", "central")
.attr("text-anchor", "middle")
.attr("font-size", 30)
.attr("fill", "black")
.attr("stroke-width", "0px")
.attr("pointer-events", "none")
.text((d) => {
return d.id
})
simulation
.nodes(graph.nodes)
.on("tick", ticked);
simulation
.force("link")
.links(graph.links)
}
//###############################################
//############# Update Positions ################
//###############################################
function ticked() {
// update link positions
link
.attr("x1", function (d) {
return d.source.x;
})
.attr("y1", function (d) {
return d.source.y;
})
.attr("x2", function (d) {
return d.target.x;
})
.attr("y2", function (d) {
return d.target.y;
});
// update node positions
node
.attr("transform", function (d) {
return "translate(" + d.x + ", " + d.y + ")";
});
}
//###############################################
//################ Drag Nodes ###################
//###############################################
var lineX;
var lineY;
var isPlugged = true;
function dragStarted(event, d) {
if (!event.active) simulation.alphaTarget(0.3).restart();
d.fx = d.x;
d.fy = d.y;
lineX = d.x
lineY = d.y
}
function dragged(event, d) {
d.fx = event.x;
d.fy = event.y;
var root = graph.nodes.find(element => (element.id === 0))
var distance = (root.x - d.x) * 2 + (root.y - d.y) * 2
if (isPlugged && d.id === 1) {
var indexOfLink = graph.links.findIndex(element => (element.source.id === d.id))
if (distance < 0) {
distance = -distance
}
if (distance > 1000) {
graph.links.splice(indexOfLink, 1)
isPlugged = false;
}
} else {
if (distance < 0) {
distance = -distance
}
if (distance < 20) {
graph.links.push({ source: d.id, target: root.id })
isPlugged = true;
}
}
initialize()
}
function dragEnded(event, d) {
if (!event.active) simulation.alphaTarget(0);
d.fx = undefined;
d.fy = undefined;
link.filter((a) => {
return a.source.id === d.id
}).style("stroke", "black")
}
</script>
</body>
</html>
Just apply the style to nodeContainer instead of svg - see comments below:
var svg = d3.select("svg")
.attr("class", "canvas")
.attr("width", width)
.attr("height", height)
.call(d3.zoom().on("zoom", function (event) {
svg.attr("transform", event.transform)
}))
.append("g")
// <--------- remove the style here
// remove zoom on dblclick listener
d3.select("svg").on("dblclick.zoom", null)
var linkContainer = svg.append("g").attr("class", "linkContainer")
var nodeContainer = svg.append("g").attr("class", "nodeContainer")
.style("filter", "url(#gooey)") // <---------- add the style here
Your code updated:
<!DOCTYPE html>
<html>
<head>
<meta charset="utf-8">
<meta name="viewport" content="width=device-width, initial-scale=1">
<title>D3v6 Playground</title>
<!-- call external d3.js framework -->
<script src="https://d3js.org/d3.v6.js"></script>
</head>
<style>
body {
overflow: hidden;
margin: 0px;
}
.canvas {
background-color: rgb(220, 220, 220);
}
.node {
cursor: pointer;
}
.node:hover {
stroke: red
}
.link {
fill: none;
cursor: default;
stroke: rgb(0, 0, 0);
stroke-width: 3px;
}
</style>
<body>
<svg id="svg"> </svg>
<script>
var graph = {
"nodes": [
{
"id": 0,
},
{
"id": 1,
},
{
"id": 2,
}
],
"links": [
{
"source": 1,
"target": 0,
},
{
"source": 2,
"target": 0,
},
]
}
var width = window.innerWidth
var height = window.innerHeight
var svg = d3.select("svg")
.attr("class", "canvas")
.attr("width", width)
.attr("height", height)
.call(d3.zoom().on("zoom", function (event) {
svg.attr("transform", event.transform)
}))
.append("g")
// remove zoom on dblclick listener
d3.select("svg").on("dblclick.zoom", null)
var linkContainer = svg.append("g").attr("class", "linkContainer")
var nodeContainer = svg.append("g").attr("class", "nodeContainer")
.style("filter", "url(#gooey)")
var isSpliced = false;
var simulation = d3.forceSimulation()
.force("link", d3.forceLink().id(function (d) {
return d.id;
}).distance(150))
.force("charge", d3.forceManyBody().strength(-50))
.force("center", d3.forceCenter(width / 2, height / 2))
.force("collision", d3.forceCollide().radius(30))
//###############################################
//######### SVG Filter for Gooey effect #########
//###############################################
var defs = svg.append("defs");
var filter = defs.append("filter").attr("id", "gooey");
filter.append("feGaussianBlur")
.attr("in", "SourceGraphic")
.attr("stdDeviation", "10")
.attr("result", "blur");
filter.append("feColorMatrix")
.attr("in", "blur")
.attr("mode", "matrix")
.attr("values", "1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 50 -5")
.attr("result", "gooey");
filter.append("feComposite")
.attr("in", "SourceGraphic")
.attr("in2", "gooey")
.attr("operator", "atop");
initialize()
//###############################################
//############## Initialization #################
//###############################################
function initialize() {
link = linkContainer.selectAll(".link")
.data(graph.links)
.join("line")
.attr("class", "link")
node = nodeContainer.selectAll(".node")
.data(graph.nodes, d => d.id)
.join("g")
.attr("class", "node")
.call(d3.drag()
.on("start", dragStarted)
.on("drag", dragged)
.on("end", dragEnded)
)
node.selectAll("circle")
.data(d => [d])
.join("circle")
.attr("r", 30)
.style("fill", "white")
node.selectAll("text")
.data(d => [d])
.join("text")
.style("class", "icon")
.attr("font-family", "FontAwesome")
.attr("dominant-baseline", "central")
.attr("text-anchor", "middle")
.attr("font-size", 30)
.attr("fill", "black")
.attr("stroke-width", "0px")
.attr("pointer-events", "none")
.text((d) => {
return d.id
})
simulation
.nodes(graph.nodes)
.on("tick", ticked);
simulation
.force("link")
.links(graph.links)
}
//###############################################
//############# Update Positions ################
//###############################################
function ticked() {
// update link positions
link
.attr("x1", function (d) {
return d.source.x;
})
.attr("y1", function (d) {
return d.source.y;
})
.attr("x2", function (d) {
return d.target.x;
})
.attr("y2", function (d) {
return d.target.y;
});
// update node positions
node
.attr("transform", function (d) {
return "translate(" + d.x + ", " + d.y + ")";
});
}
//###############################################
//################ Drag Nodes ###################
//###############################################
var lineX;
var lineY;
var isPlugged = true;
function dragStarted(event, d) {
if (!event.active) simulation.alphaTarget(0.3).restart();
d.fx = d.x;
d.fy = d.y;
lineX = d.x
lineY = d.y
}
function dragged(event, d) {
d.fx = event.x;
d.fy = event.y;
var root = graph.nodes.find(element => (element.id === 0))
var distance = (root.x - d.x) * 2 + (root.y - d.y) * 2
if (isPlugged && d.id === 1) {
var indexOfLink = graph.links.findIndex(element => (element.source.id === d.id))
if (distance < 0) {
distance = -distance
}
if (distance > 1000) {
graph.links.splice(indexOfLink, 1)
isPlugged = false;
}
} else {
if (distance < 0) {
distance = -distance
}
if (distance < 20) {
graph.links.push({ source: d.id, target: root.id })
isPlugged = true;
}
}
initialize()
}
function dragEnded(event, d) {
if (!event.active) simulation.alphaTarget(0);
d.fx = undefined;
d.fy = undefined;
link.filter((a) => {
return a.source.id === d.id
}).style("stroke", "black")
}
</script>
</body>
</html>
I want to add text outside the circle using d3.js but only text is not getting added,other code works fine. How to add text to circle?
//create somewhere to put the force directed graph
var svg = d3.select("svg"),
width = +svg.attr("width"),
height = +svg.attr("height");
var radius = 15;
var nodes_data = [{
"name": "Bacillus",
"sex": "F"
}, {
"name": "Candida",
"sex": "M"
}, {
"name": "Dorhea",
"sex": "M"
}, {
"name": "Pichia",
"sex": "F"
},
]
//Sample links data
//type: A for Ally, E for Enemy
var links_data = [{
"source": "Candida",
"target": "Bacillus",
"type": "A"
}, {
"source": "Dorhea",
"target": "Candida",
"type": "E"
}, {
"source": "Bacillus",
"target": "Dorhea",
"type": "A"
}, {
"source": "Bacillus",
"target": "Pichia",
"type": "C"
},
]
var linkElements = svg.append("g")
.attr("class", "links")
.selectAll("line")
.data(links)
.enter().append("line")
.attr("stroke-width", 1)
.attr("stroke", "rgba(50, 50, 50, 0.2)")
var nodeElements = svg.append("g")
.attr("class", "nodes")
.selectAll("circle")
.data(nodes)
.enter().append("circle")
.attr("r", 18)
.attr("fill", getNodeColor)
var textElements = svg.append("g")
.attr("class", "texts")
.selectAll("text")
.data(nodes)
.enter().append("text")
.text(function(node) {
return node.name
})
.attr("font-size", 20)
.attr("dx", 15)
.attr("dy", 4)
simulation.nodes(nodes).on('tick', () => {
nodeElements
.attr('cx', function(node) {
return node.x
})
.attr('cy', function(node) {
return node.y
})
textElements
.attr('x', function(node) {
return node.x
})
.attr('y', function(node) {
return node.y
})
linkElements
.attr('x1', function(link) {
return link.source.x
})
.attr('y1', function(link) {
return link.source.y
})
.attr('x2', function(link) {
return link.target.x
})
.attr('y2', function(link) {
return link.target.y
})
})
//set up the simulation
var simulation = d3.forceSimulation()
//add nodes
.nodes(nodes_data);
var link_force = d3.forceLink(links_data)
.id(function(d) {
return d.name;
});
var charge_force = d3.forceManyBody()
.strength(-2500);
var center_force = d3.forceCenter(width / 2, height / 2);
simulation
.force("charge_force", charge_force)
.force("center_force", center_force)
.force("links", link_force);
//add tick instructions:
simulation.on("tick", tickActions);
//draw lines for the links
var link = svg.append("g")
.attr("class", "links")
.selectAll("line")
.data(links_data)
.enter().append("line")
.attr("stroke-width", 2)
.style("stroke", linkColour);
//draw circles for the nodes
var node = svg.append("g")
.attr("class", "nodes")
.selectAll("circle")
.data(nodes_data)
.enter()
.append("circle")
.attr("r", radius)
.attr("fill", circleColour);
node.append("text")
.attr("x", 12)
.attr("dy", ".35em")
.text(function(d) {
return d.name;
});
var drag_handler = d3.drag()
.on("start", drag_start)
.on("drag", drag_drag)
.on("end", drag_end);
drag_handler(node)
/** Functions **/
//Function to choose what color circle we have
//Let's return blue for males and red for females
function circleColour(d) {
if (d.sex == "M") {
return "blue";
} else {
return "pink";
}
}
//Function to choose the line colour and thickness
//If the link type is "A" return green
//If the link type is "E" return red
function linkColour(d) {
if (d.type == "A") {
return "green";
} else {
return "red";
}
}
//drag handler
//d is the node
function drag_start(d) {
if (!d3.event.active) simulation.alphaTarget(0.3).restart();
d.fx = d.x;
d.fy = d.y;
}
function drag_drag(d) {
d.fx = d3.event.x;
d.fy = d3.event.y;
}
function drag_end(d) {
if (!d3.event.active) simulation.alphaTarget(0);
d.fx = null;
d.fy = null;
}
function tickActions() {
//constrains the nodes to be within a box
node
.attr("cx", function(d) {
return d.x = Math.max(radius, Math.min(width - radius, d.x));
})
.attr("cy", function(d) {
return d.y = Math.max(radius, Math.min(height - radius, d.y));
});
link
.attr("x1", function(d) {
return d.source.x;
})
.attr("y1", function(d) {
return d.source.y;
})
.attr("x2", function(d) {
return d.target.x;
})
.attr("y2", function(d) {
return d.target.y;
});
}
.links line {
stroke: #999;
stroke-opacity: 0.6;
}
.nodes circle {
stroke: black;
stroke-width: 0px;
}
svg {
border: 1px solid black;
}
<script src="https://d3js.org/d3.v4.min.js"></script>
<svg width="400" height="400"></svg>
The above code adds circles with colors and links between circle but i want to add text also outside the circle but when I apply code to add text its not adding text.how to solve this problem?
The code to add text is:
node.append("text")
.attr("x", 12)
.attr("dy", ".35em")`enter code here`
.text(function(d) { return d.name; });
var drag_handler = d3.drag()
.on("start", drag_start)
.on("drag", drag_drag)
.on("end", drag_end);
I have made a force directed graph which looks similar to this.
I would like the Nine Inch Nails node, in the centre, to be an image but the rest of the nodes to just be circles. Following this answer it seemed not too difficult but I just can't get my head around the combonation of svg, defs, patterns and d3.
My code is:
var simulation =
d3.forceSimulation()
.force("charge", d3.forceManyBody().strength(-50))
.force("collide", d3.forceCollide().radius(function (d) { return 15 - d.group}).strength(2).iterations(2))
.force("link", d3.forceLink().id(function(d, i) { return i;}).distance(20).strength(0.9))
.force("center", d3.forceCenter(width/2, height/2))
.force('X', d3.forceX(width/2).strength(0.15))
.force('Y', d3.forceY(height/2).strength(0.15));
var link = svg.append("g")
.attr("class", "links")
.selectAll("line")
.data(graph.links)
.enter().append("line")
var defs = svg.append('svg:defs');
defs.append("svg:pattern")
.attr("id", "vit-icon")
.attr("width", 48)
.attr("height", 48)
.attr("patternUnits", "userSpaceOnUse")
.append("svg:image")
.attr("xlink:href", "http://placekitten.com/g/48/48")
.attr("width", 48)
.attr("height", 48)
.attr("x", width/2)
.attr("y", height/2)
var node = svg.append("g")
.attr("class", "nodes")
.selectAll("circle")
.data(graph.nodes)
.enter().append("circle")
.attr("id", function(d, i) { return 'c'+i})
.attr("r", radius)
.attr("fill", function(d) {
if(d.group==0) {return "url(#vit-icon)";}
else {return color(d.group); }
})
.call(d3.drag()
.on("start", dragstarted)
.on("drag", dragged)
.on("end", dragended));
As I say, it seems straight forward in my mind. Basically what I think I'm trying to do is have the image in the svg pattern, then use an if statement to tell my root node to use the image url rather than fill with colour.
In dev tools I can see inspect the image and it shows the blue area it would take up and the node I want it to be associatated to has the 'url(#vit-icon)' as it's fill attribute. But it is not showing the image or any fill for that node.
What am I doing wrong? Or is this the complete wrong approach?
Thanks.
In your defs, just change:
.attr("x", width/2)
.attr("y", height/2)
To:
.attr("x", 0)
.attr("y", 0);
Here is a demo:
var nodes = [{
"id": 1,
}, {
"id": 2,
}, {
"id": 3,
}, {
"id": 4,
}, {
"id": 5,
}, {
"id": 6,
}, {
"id": 7,
}, {
"id": 8,
}];
var links = [{
source: 1,
target: 2
}, {
source: 1,
target: 3
}, {
source: 1,
target: 4
}, {
source: 2,
target: 5
}, {
source: 2,
target: 6
}, {
source: 1,
target: 7
}, {
source: 7,
target: 8
}];
var index = 10;
var svg = d3.select("svg"),
width = +svg.attr("width"),
height = +svg.attr("height"),
node,
link;
var defs = svg.append('svg:defs');
defs.append("svg:pattern")
.attr("id", "vit-icon")
.attr("width", 1)
.attr("height", 1)
.append("svg:image")
.attr("xlink:href", "http://66.media.tumblr.com/avatar_1c725152c551_128.png")
.attr("width", 48)
.attr("height", 48)
.attr("x", 0)
.attr("y", 0);
var simulation = d3.forceSimulation()
.force("link", d3.forceLink().id(function(d) {
return d.id;
}).distance(100))
.force("collide", d3.forceCollide(50))
.force("charge", d3.forceManyBody())
.force("center", d3.forceCenter(width / 2, height / 2));
link = svg.selectAll(".link")
.data(links, function(d) {
return d.target.id;
})
link = link.enter()
.append("line")
.attr("class", "link");
node = svg.selectAll(".node")
.data(nodes, function(d) {
return d.id;
})
node = node.enter()
.append("g")
.attr("class", "node")
.call(d3.drag()
.on("start", dragstarted)
.on("drag", dragged)
.on("end", dragended));
node.append("circle")
.attr("r", d=> d.id === 1 ? 24 : 14)
.style("fill", function(d) {
if (d.id === 1) {
return "url(#vit-icon)";
} else {
return "teal"
}
})
simulation
.nodes(nodes)
.on("tick", ticked);
simulation.force("link")
.links(links);
function ticked() {
link
.attr("x1", function(d) {
return d.source.x;
})
.attr("y1", function(d) {
return d.source.y;
})
.attr("x2", function(d) {
return d.target.x;
})
.attr("y2", function(d) {
return d.target.y;
});
node
.attr("transform", function(d) {
return "translate(" + d.x + ", " + d.y + ")";
});
}
function dragstarted(d) {
if (!d3.event.active) simulation.alphaTarget(0.3).restart()
}
function dragged(d) {
d.fx = d3.event.x;
d.fy = d3.event.y;
}
function dragended(d) {
if (!d3.event.active) simulation.alphaTarget(0);
d.fx = undefined;
d.fy = undefined;
}
.link {
stroke: #aaa;
}
.node {
pointer-events: all;
stroke: none;
stroke-width: 40px;
}
<script src="https://d3js.org/d3.v4.min.js"></script>
<svg width="500" height="300"></svg>
I currently have a hover effect on each node, as well as a hover effect on each element of the legend.
I want to execute the effect when the user interacts with the legend so the relevant node on the chart is highlighted and visa versa. I also want to toggle the effect on and off.
So when the user clicks/hovers over a node the relevant legend item is highlighted in grey.
And when the user clicks/hovers over a legend item the relevant node is highlighted with a black stroke.
I have had a look at the following (Selectable Elements) but can't work out how to apply this to my code.
My understanding so far is that I need to apply a class (something like .selected) to the related element on mouseover & when toggled.
JSFiddle
//Nodes V2
var width = 300,
height = 300,
colors = d3.scale.category20b();
var force = d3.layout.force()
.gravity(.2)
.charge(-3000)
.size([width, height]);
//Svg Chart SVG Settings
var svg = d3.select("#chart").append("svg:svg")
.attr("width", width)
.attr("height", height);
var root = getData();
var nodes = flatten(root),
links = d3.layout.tree().links(nodes);
nodes.forEach(function(d, i) {
d.x = width/2 + i;
d.y = height/2 + 100 * d.depth;
});
root.fixed = true;
root.x = width / 2;
root.y = height / 2;
force.nodes(nodes)
.links(links)
.start();
var link = svg.selectAll("line")
.data(links)
.enter()
.insert("svg:line")
.attr("class", "link");
var node = svg.selectAll("circle.node")
.data(nodes)
.enter()
.append("svg:circle")
.attr("r", function(d) { return d.size/200; })
//.attr('fill', function(d) { return d.color; }) // Use Data colors
.attr('fill', function(d, i) { return colors(i); }) // Use D3 colors
.attr("class", "node")
.call(force.drag)
.on('click', function(){
d3.select( function (d){
return i.li;
})
.style('background', '#000')
})
//Adding an event - mouseover/mouseout
.on('mouseover', function(d) {
d3.select(this)
.transition()//Set transition
.style('stroke', '#222222')
.attr("r", function(d) { return (d.size/200) + 2; })
})
.on('mouseout', function(d) {
d3.select(this)
.transition()
.style('stroke', '#bfbfbf')
.attr("r", function(d) { return (d.size/200) - 2; })
d3.select('ul')
});
//Add a legend
var legend = d3.select('#key').append('div')
.append('ul')
.attr('class', 'legend')
.selectAll('ul')
.data(nodes)
.enter().append('li')
.style('background', '#ffffff')
.text(function(d) { return d.name; })
.on('mouseover', function(d) {
d3.select(this)
.transition().duration(200)//Set transition
.style('background', '#ededed')
})
.on('mouseout', function(d) {
d3.select(this)
.transition().duration(500)//Set transition
.style('background', '#ffffff')
})
.append('svg')
.attr('width', 10)
.attr('height', 10)
.style('float', 'right')
.style('margin-top', 4)
.append('circle')
.attr("r", 5)
.attr('cx', 5)
.attr('cy', 5)
.style('fill', function(d, i) { return colors(i); });
//Add Ticks
force.on("tick", function(e) {
link.attr("x1", function(d) { return d.source.x; })
.attr("y1", function(d) { return d.source.y; })
.attr("x2", function(d) { return d.target.x; })
.attr("y2", function(d) { return d.target.y; });
node.attr("cx", function(d) { return d.x; })
.attr("cy", function(d) { return d.y; });
});
//Center Node
var userCenter = d3.select("svg").append("svg:circle")
.attr('class', 'user')
.attr('r', 30)
.attr('cx', width/2)
.attr('cy', height/2)
.style('fill', '#bfbfbf')
var label = d3.select('svg').append("text")
.text('USER')
.attr('x', width/2)
.attr('y', height/2)
.attr('text-anchor','middle')
.attr('transform', 'translate(0, 5)')
.style('font-size','12px')
.attr('fill','#666666')
//Fix Root
function flatten(root) {
var nodes = [];
function recurse(node, depth) {
if (node.children) {
node.children.forEach(function(child) {
recurse(child, depth + 1);
});
}
node.depth = depth;
nodes.push(node);
}
recurse(root, 1);
return nodes;
}
//Data
function getData() {
return {
"name": "flare",
"size": 0,
"children": [
{ "name": "Jobs", "size": 3743 },
{ "name": "Contact", "size": 3302 },
{ "name": "Dietary", "size": 2903 },
{ "name": "Bookings", "size": 4823 },
{ "name": "Menu", "size": 3002 },
{ "name": "Cards", "size": 3120 },
{ "name": "Newsletter", "size": 3302 }
]
};
}
You should use the same event(mouseover, mouseout) functions for the nodes and legend items.
//Adding an event - mouseover/mouseout
.on('mouseover', onMouseover)
.on('mouseout', onMouseout);
...
//Legend
.on('mouseover', onMouseover)
.on('mouseout', onMouseout)
Then, you use the data passed to the functions to select the correct elements to change the style.
function onMouseover(elemData) {
d3.select("svg").selectAll("circle")
.select( function(d) { return d===elemData?this:null;})
.transition()//Set transition
.style('stroke', '#222222')
.attr("r", function(d) { return (d.size/200) + 2; })
d3.select('#key').selectAll('li')
.select( function(d) { return d===elemData?this:null;})
.transition().duration(200)//Set transition
.style('background', '#ededed')
}
function onMouseout(elemData) {
d3.select("svg").selectAll("circle")
.select( function(d) { return d===elemData?this:null;})
.transition()
.style('stroke', '#bfbfbf')
.attr("r", function(d) { return (d.size/200) - 2; })
d3.select('#key').selectAll('li')
.select( function(d) { return d===elemData?this:null;})
.transition().duration(500)//Set transition
.style('background', '#ffffff')
}
Here is the updated JSFiddle